U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX23101595: 16S From root samples
1 ILLUMINA (Illumina Genome Analyzer II) run: 245,516 spots, 147.8M bases, 80.5Mb downloads

Design: v3-v4
Submitted by: University of Nottingham
Study: salicylic acid is involved in regulating plant root architecture.
show Abstracthide Abstract
Besides playing a crucial role in plant immunity, increasing evidence shows that salicylic acid (SA) is also involved in regulating plant root architecture. However, the transcriptional regulatory network and core regulators controlling SA-mediated plant root development, and whether these regulators are functionally conserved in angiosperms, are still unclear. Here, we found that, like in Arabidopsis, exogenous SA attenuates root growth in rice via a parallel pathway of immune response. We further reconstructed the regulatory network of SA regulating rice root development and identified new regulators by blocking immune signaling using relevant mutants. Loss-of-function of these regulators altered the response of rice roots to SA treatment and reshaped the root-associated microbiome colonization, which is basically conserved in the eudicot Arabidopsis. Our results provide new insights and novel breeding targets for mitigating plant defense-growth tradeoffs to enhance crop performance.
Sample:
SAMN39242016 • SRS20057519 • All experiments • All runs
Organism: root metagenome
Library:
Name: PCR-R-bc82_S82_L001_R1_001
Instrument: Illumina Genome Analyzer II
Strategy: WXS
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 245,516 spots, 147.8M bases, 80.5Mb
Run# of Spots# of BasesSizePublished
SRR27429158245,516147.8M80.5Mb2024-11-19

ID:
31210109

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...